How to restore a hacked Linux server

Every sysadmin will try its best to secure the system/s he is managing. Hopefully you never had to restore your own system from a compromise and you will not have to do this in the future. Working on several projects to restore a compromised Linux system for various clients, I have developed a set of rules that others might find useful in similar situations. The type of hacks encountered can be very variate and you might see very different ones than the one I will present, or I have seen live, but even so, this rules might be used as a starting point.
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