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FreeBSD Foundation: FreeBSD in Science

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BSD

FreeBSD has always been an exceptional platform for scientific computing, thanks in large part to its unrivaled reliability. This allows for computational analyses that need to run for weeks or months, a risky proposition on many platforms. Even if an intensive analysis can be parallelized, restarts are still expensive in terms of time, compute resources, and electric bills.

The FreeBSD ports system is another advantage for scientific computing. It facilitates instant installation of over 30,000 software packages, with the option to build any of them from source using non-portable optimizations such as -march=native. This can make a big difference in run time for software that benefits from the latest SSE and AVX CPU features.

FreeBSD ports has seen continued growth and maturation in the scientific categories, now boasting over 2,000 scientific ports across astro, biology, cad, math, and science, with the biology category recently surging past the 200 mark to 228. A major milestone is the biostar-tools meta-port, which makes it trivial for FreeBSD users to install all of the software needed to learn from the Biostar Handbook, the premier introductory text for budding bioinformaticians.

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